rs29832112 SNP Detail

Summary

• ID
  rs29832112
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89262217 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCTCAGGA GCTGCTCTTA
  GAGAAAACAA TTAGTGAACA ATGAACGGCT TGTGCCAGCC CCAACTGGAT CATACCAGAA
  CAGAACAGCT CAGATTAGAT GAAAAACACC AGAATACAGC ATATAAGCCC CCTTTAGACC
  AATCCAGACA AGGCTAGAAC TCACCAGAAT TAACCAGCCA AGACCAGCTC ATATCAGACC
  W
  GACCCAGCTA GACCCTACCA GCACAGACCA GACCAAAGAA GAATAAACCA AGCCAAAACA
  GACTAAACAG AACAGAACAG GTTAGATTTG ACTAATCCAG ACCAGGCTAG AACATACCAG
  CACAAGCCAG ACCAGACTAA CTTAACCAAT CCAGACCAAA CCAACTACAC CAGAATAGTT
  TAGACTAGAT TAGATCAGGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45867357	mCV23956196	ABI	CRAMUS_MOUSE	f	SNP	A	T	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29832112					SNP	A	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89262217 () rs orientation: forward

Symbol	Name	Function Class
4930512J16Rik	RIKEN cDNA 4930512J16 gene	within coordinates
Rr379731	regulatory region 379731	within coordinates
Rr634091	regulatory region 634091	1964 bp distal
Rr634092	regulatory region 634092	within coordinates
Rr634093	regulatory region 634093	876 bp proximal
Rr634094	regulatory region 634094	1102 bp proximal
Rr634095	regulatory region 634095	1588 bp proximal