rs29829722 SNP Detail

Summary

• ID
  rs29829722
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:33688140 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTC AGTACCAAAT AAGATACTAG
  R
  TAAGTATTAT GGAAAATCTA ATATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45868435	mCV23918409	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss133107879	ENSMUSSNP750149	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs29829722					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:33688140 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Exoc4	exocyst complex component 4			Intron
				Noncoding-Transcript-Variant
Rr628208	regulatory region 628208			622 bp proximal
Rr628209	regulatory region 628209			1202 bp proximal