rs29825421 SNP Detail

Summary

• ID
  rs29825421
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127998244 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCACACTGC TGACACCACA GCACACGGCA GCAAACACCA
  GGCTCAGAAT GAGGTGCACC TGCAGCAGCC TCATTGCCGA ATCTGATGTA AGGTAGAACC
  R
  CCCCTCCTCC AGCTGTTTTC TGTTGTGTGG GCCACATGTG CTGGGCCAGA GGAGCAGCTC
  CAGCCACCGT GCCAGCTGTC AAGGGATTTC TGGACTGGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45368594	mCV23908286	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss147553405	ENSMUSSNP5682231	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29825421					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127998244 () rs orientation: forward

Symbol	Name	Function Class
Bcl2l11	BCL2 like 11	Intron
Rr367306	regulatory region 367306	within coordinates
Rr564662	regulatory region 564662	551 bp distal
Rr564663	regulatory region 564663	within coordinates
Rr564664	regulatory region 564664	766 bp proximal