rs29823504 SNP Detail

Summary

• ID
  rs29823504
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153419028 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACATCCGCCG GGCGTGGTGG TGCACGCCTT TAATCCCAAC ACTCGGGAGG CAGAGGCAGG
  CGGATTTCTG AGTTCGAGGC CAGCCTGGTC TACAAAGTGA GCTCCAGGAC AGCCAGGGCT
  ATACAGAGAA ACCCTGTCTC GAAAAACCAA AACAACAACA ACAACAACAA AACAACAACA
  ACAAAAAACA ACAAAAAAAC ACCAACATCC AAAAGGAGGG CTTGGCCCAC CGCAGGCTTA
  AATGGGAGAA ATCCTTATTT CAAACAATAG AGCAGTAACT CCCCACCCTG TTGCTGGGTT
  Y
  CCCTTTGCCC AGGTCTATGG GAACATAGTG GAGGTCCCTC CTGCAGATAG CACAACAGTC
  TTTTGAGGCC ACCTCTTCCT TGGGGGGTGG GGGTGGGGCC AAGCAGCAGC AACAACCTGG
  CTTTTAGCCA AGCAAATGAG CCCAGGGACA CTGCACAGGG CGCAGCCTCC CAGCCTCAGT
  TCCTTTGCTA TATCACACAA TGAACGGATC ATTTCAGGGT GCAAGGGTGT GGCTGAAGCT
  GGTGATGGGC CATGGCAGGT GTGTGGACAG AGGATGACTC TCCAATAATC TCCAGGGCTC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45367663	mCV23861250	ABI	CRAMUS_MOUSE	f	SNP	C	C		T
ss147997110	ENSMUSSNP4004397	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs29823504					SNP	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153419028 () rs orientation: forward

Symbol	Name	Function Class
Rr567686	regulatory region 567686	615 bp distal
Rr567687	regulatory region 567687	within coordinates
Rr567688	regulatory region 567688	597 bp proximal