rs29818508 SNP Detail

Summary

• ID
  rs29818508
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102635068 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCTTCTTTT CACCCTTCTC CTTTTATCTT TCTGACATCT
  TTTTCTGGAT ATTCTCTATT TCTTGAGGAG ACTTCAAGTG ATAGGAGGGA GAAAGTAAAA
  R
  AGCAAAGCTC TCAAGAACTC CACTGACTTC ATCAGAAATC TGAATTTCCT TCAGGTCTCC
  AACTGCTCAA AACCTGCCTC CCCACTTCTA AGCAGATAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45366220	mCV25049789	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss147124504	ENSMUSSNP3289877	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29818508					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102635068 () rs orientation: forward

Symbol	Name	Function Class
Rr561739	regulatory region 561739	747 bp distal
Rr561740	regulatory region 561740	654 bp distal
Rr561741	regulatory region 561741	216 bp distal
Rr561742	regulatory region 561742	463 bp distal
Rr561743	regulatory region 561743	671 bp proximal