rs29818399 SNP Detail

Summary

• ID
  rs29818399
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:100501997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTC CTTTATCAAG AAGTTGTGGC
  R
  CACATCTTTA ATCCCAGCAC TTGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45865611	mCV24432938	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
ss148925473	ENSMUSSNP1283488	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss321626961	CHEV_5_100783157	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29818399					SNP	G	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:100501997 () rs orientation: forward

Symbol	Name	Function Class
Cpgi16107	CpG island 16107	575 bp proximal
Rr615455	regulatory region 615455	400 bp distal