rs29808426 SNP Detail

Summary

• ID
  rs29808426
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:128136425 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCATTGTGGC AGGGAGCATG GCAGCACACA GCAGATGGGG
  TGCTGGAGAG GTAACTGGAA GCTACATCCT GATCTGCAGT CTGCAGGCAG CAAGGACGGG
  S
  ACACACACAC ACACACACAC ACACACAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG
  AGAGAGAGAA GAGAGAGGCC CATCCCCAGT GGCACACCA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45364487	mCV22523403	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	C
ss147556612	ENSMUSSNP1138938	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29808426					SNP	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:128136425 () rs orientation: forward

Symbol	Name	Function Class
Rr397297	regulatory region 397297	681 bp upstream
Rr564694	regulatory region 564694	27 bp proximal
Rr564695	regulatory region 564695	652 bp proximal
Rr564696	regulatory region 564696	1300 bp proximal
Tssr26154	transcription start site region 26154	494 bp downstream
Tssr26155	transcription start site region 26155	530 bp downstream