rs29776149 SNP Detail

Summary

• ID
  rs29776149
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:75989201 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCT TCCTACTCTC CAACCTCTGT
  R
  AATGAGCAAA CCACTCCCCC AGCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45862410	mCV25197714	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss148692899	ENSMUSSNP4967247	ENSEMBL	ENSEMBL_Sanger	f	SNP			A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29776149					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:75989201 () rs orientation: forward

Symbol	Name	Function Class
Rr613487	regulatory region 613487	1609 bp distal
Rr613488	regulatory region 613488	1515 bp proximal
Tssr46714	transcription start site region 46714	1900 bp upstream
Tssr46715	transcription start site region 46715	1914 bp upstream
Tssr51404	transcription start site region 51404	50 bp upstream