rs29776008 SNP Detail

Summary

• ID
  rs29776008
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165947299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGATGCGA CCTGGAAATG
  TGGAAAGAGG CACACATGGC AGTTTCTAAG ACACTTGGAT GCAACTGGCT TCCTTTGTGA
  CTCTGGGCAT CTTCTTCCAC AACCTACAGC AGCGTATGGA ATGCGTGTGA CTTCTGATTA
  TGCTGTCACA GGAAGGAAGC ACACCTCCGC ATTCATCTGC TCCCTATAGG AGCTGTTTTG
  K
  ATAACGGTGT CACCTGCACG TTAACAAATA CCAACCAGAA GATCAGTAGA CCCAGGAATT
  CAGATCCCAT CCCTGGCACC TGTCGTTCTA GAAACATCCT GAACTGGGCA GCTTTGACCT
  GCTGCCATTG GGTTTGGGGG CTACGGGTTG GGGGGGTGGA GGTCCCTGGT CTGAGTGTCA
  GAGACAATCC CACTAGGCTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45363419	mCV23749136	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	G
ss148249544	ENSMUSSNP159179	ENSEMBL	ENSEMBL_Sanger	f	SNP	T			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29776008					SNP	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165947299 () rs orientation: forward

Symbol	Name	Function Class
Rr570135	regulatory region 570135	355 bp proximal
Rr570136	regulatory region 570136	1265 bp proximal
Sulf2	sulfatase 2	Intron