rs29768378 SNP Detail

Summary

• ID
  rs29768378
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127469092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCCAAGACA AACCTTTTTC CATATGAAGT TGGCTTTCTT
  GGGTGTTTTG TTACAGTAAC AGAAACGAGG CAGACCAACA TGGCTGCCAT TGAGATCAAG
  Y
  GAAGAAGTAA AAGGCTTCCA GCATCCTTGG CATGCCCCAA GCAGGAGTAG GTCTTCTTGT
  TGGGCACCTG TGCACAAATC AGACCTCTCT GGAGTCCTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45362992	mCV25215326	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss147536650	ENSMUSSNP485630	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29768378					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127469092 () rs orientation: forward

Symbol	Name	Function Class
Rr564573	regulatory region 564573	979 bp distal
Rr564574	regulatory region 564574	873 bp proximal