rs29760365 SNP Detail

Summary

• ID
  rs29760365
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16364760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTCCTCCT AGAAGCACTA ATAACCTTTT TTTAAAGTAA
  ACTGATTGTT AGACAATGTA TACAGATATA CAATGCGTTT TAAATACTAT CTCACTATGT
  Y
  AGGTGGTATC ATATATGGGC TTTTGAATAT ATTTCTTAAT GATTTATTTT TAATATTTTA
  TGTTCTTTTA CTATGCTTAA TTCCCAAAGA ATATTTTGTA                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49565261	NES12888136	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	T	T	C	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29760365					SNP	C	T	C	T	T	C	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49565261	NES12888136	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16364760 () rs orientation: forward

Symbol	Name	Function Class
Rr573795	regulatory region 573795	361 bp proximal
Rr573796	regulatory region 573796	437 bp proximal