rs29760126 SNP Detail

Summary

• ID
  rs29760126
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16990448 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACACATTC ACTGGCTTCC
  ATACACACTA GATTCAGTGC CCACAGAACA TCTAAACCCT CTGTAGGCTA TTTGTCTTTC
  TTAACATTCT ATTGTATTTT TTTCTCTTTT CATTTTTGTA ACCCTCCCAT TTCTTTCTTC
  TTTATTTGTT CGACTACCTG CTGTACATTA TCAACAATAC CAGTGTCAGA AATCAGGTTG
  R
  TGTTTTAGCA CCCATACCTC ATTTCCAATG AAAGCCCTGT CATTGACTTT GTGTCTATCC
  CCTGATTATT TGGATCCACA CTTCACTCTT TCTCTGGTCA CAACTTAATT CTTGTTTCTG
  TCACAAGTCC TCACTTTCCT CTCCCCTGGA ATAAACTGCT CACTTGCATG CAGTAAGCAA
  TAATCTTTAA GGGCTTCTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss49565742	NES12906724	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs29760126					SNP	G	G	G	G	G	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49565742	NES12906724	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16990448 () rs orientation: forward

Symbol	Name	Function Class
Rr573811	regulatory region 573811	1905 bp proximal