rs29759193 SNP Detail

Summary

• ID
  rs29759193
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16990867 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTATATC TGACACATGG
  CTTCCAGGTA ATTCTTCCCT AAGCACAGGC TGCACTTAGA AATGCACTCA CTTACTTGCT
  ATTAACAACA GAATGACTCT GACACTCTAG AGATCAGTCC GTGTCCCCTG CTCCCCTCCA
  TTTTATCTAA CCACATAAAC CATGCATTTC AAACAATCAC ATTAAAGAGA TTTCGAGATA
  K
  TCTGCATCCT ACTTTGTGAG GTAAACCTTG CTTAAAGGCA CCTTTCAAAT TCCTAGTATC
  CTCTTTTTTA AAAAATTTTA AAGATTTATT TATTTATTAT GTGTAAGTAC ACTGTATCTG
  TCTTCAGACA CCCTGGAATA AGGCAACAGA TCTCATTATG GATGGTTGTG AACCACCATG
  TGGTTGCTGG GATTTGAACT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss49565739	NES12906728	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	T	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs29759193					SNP	G	G	G	G	G	G	G	G	G	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49565739	NES12906728	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16990867 () rs orientation: forward

Symbol	Name	Function Class
Rr573811	regulatory region 573811	1486 bp proximal