rs29759192 SNP Detail

Summary

• ID
  rs29759192
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16990907 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCACAGGC TGCACTTAGA
  AATGCACTCA CTTACTTGCT ATTAACAACA GAATGACTCT GACACTCTAG AGATCAGTCC
  GTGTCCCCTG CTCCCCTCCA TTTTATCTAA CCACATAAAC CATGCATTTC AAACAATCAC
  ATTAAAGAGA TTTCGAGATA GTCTGCATCC TACTTTGTGA GGTAAACCTT GCTTAAAGGC
  R
  CCTTTCAAAT TCCTAGTATC CTCTTTTTTA AAAAATTTTA AAGATTTATT TATTTATTAT
  GTGTAAGTAC ACTGTATCTG TCTTCAGACA CCCTGGAATA AGGCAACAGA TCTCATTATG
  GATGGTTGTG AACCACCATG TGGTTGCTGG GATTTGAACT CAGGACCTTT GTACACTCTT
  AACCACTGAG CCATCTTTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45459243	mCV24700937	ABI	CRAMUS_MOUSE	f	SNP		G	A					A	A
ss49565738	NES12906729	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	G	A			A	A	G	A	A	A	A
ss134647039	ENSMUSSNP5735557	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29759192					SNP	G	G	A	A	A	G	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49565738	NES12906729	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16990907 () rs orientation: forward

Symbol	Name	Function Class
Rr573811	regulatory region 573811	1446 bp proximal