rs29759191 SNP Detail

Summary

• ID
  rs29759191
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16991120 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGTATCCT CTTTTTTAAA
  AAATTTTAAA GATTTATTTA TTTATTATGT GTAAGTACAC TGTATCTGTC TTCAGACACC
  CTGGAATAAG GCAACAGATC TCATTATGGA TGGTTGTGAA CCACCATGTG GTTGCTGGGA
  TTTGAACTCA GGACCTTTGT ACACTCTTAA CCACTGAGCC ATCTTTCTAG CCCTCAAGTT
  M
  CTAGTATACT TAACCATGAC TGACTACCCC TCTTACTCTT TGGCAGAAAT ACTGTTTTAT
  TTGTTCATTT ATTTTCTGAT TTACCCTTCT ACTTAATGCT ACATGTACCT GCACCTGGTG
  CTCTCCTGCG AGGTGACCCA CTCAGCCTGG GGCTTGCCAA CCGAGACTAG GAGTATCCAG
  GCCACCAACC CACCTTCTCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss49565737	NES12906664	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	C	A	A	C	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs29759191					SNP	A	A	A	A	C	A	A	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49565737	NES12906664	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16991120 () rs orientation: forward

Symbol	Name	Function Class
Rr573811	regulatory region 573811	1233 bp proximal