rs29759190 SNP Detail

Summary

• ID
  rs29759190
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16991223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATGGATGG TTGTGAACCA
  CCATGTGGTT GCTGGGATTT GAACTCAGGA CCTTTGTACA CTCTTAACCA CTGAGCCATC
  TTTCTAGCCC TCAAGTTACT AGTATACTTA ACCATGACTG ACTACCCCTC TTACTCTTTG
  GCAGAAATAC TGTTTTATTT GTTCATTTAT TTTCTGATTT ACCCTTCTAC TTAATGCTAC
  R
  TGTACCTGCA CCTGGTGCTC TCCTGCGAGG TGACCCACTC AGCCTGGGGC TTGCCAACCG
  AGACTAGGAG TATCCAGGCC ACCAACCCAC CTTCTCAGTG AGCCCTTTCT CTGCCATAGA
  GAATTACAAG TGGTTAGTGT TTCCTTCTAC GTTCCCTTTC AATACAAATG AGCAAACAAA
  ACAACAAATA GAACCAAGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss49565736	NES12906666	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs29759190					SNP	A	A	A	A	A	G	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49565736	NES12906666	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16991223 () rs orientation: forward

Symbol	Name	Function Class
Rr573811	regulatory region 573811	1130 bp proximal