rs29759185 SNP Detail

Summary

• ID
  rs29759185
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16992355 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATTATTAA ACATTGCTCT
  TTATGAGTAA GTAAAAATAC ACATCTATAG CTGCATTATT CTGCATAACC AATGTCTAGT
  TTGGAGCAGG AGACTAATTT TAATATAAAT TAAGAAAAAA ATTAATTCTA GGCTGTATAT
  ATACATATGA TATGTGTGTG CTGATGAATG GAGTTTTTAA AGTGTCTGAT ACAGTTTACT
  Y
  CTAATCTGCT TTACATTTTG TATTTAGTAG CAAATCTACT TTTCTCTAAA GCCAACAGTA
  GTACCATAAG AGCCAGGAAC AAAAGGCTTT GGTGGTTCTT TCTGTTATTT TGCGTTTGAA
  CTTCCACATG CAAATATCTA TCTCTTTTGT CGCTTATACA ATTTGATTGA TTCCTAATTG
  ACGAGGAGCT GCTATGGATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss49565731	NES12906673	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs29759185					SNP	C	C	C	C	C	T	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49565731	NES12906673	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16992355 () rs orientation: forward

Symbol	Name	Function Class
Gm66112	predicted gene, 66112	1619 bp upstream
Rr573811	regulatory region 573811	within coordinates
Rr573812	regulatory region 573812	1129 bp proximal
Rr573813	regulatory region 573813	1630 bp proximal