rs29758252 SNP Detail

Summary

• ID
  rs29758252
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16994113 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAGCAACAT GTATAATTAT
  GATAATCGGT CCCTGGCGAA CCCTCCGAAT CGTATACATT CAGTTAAATG CAATAAACAT
  TAGGCACTAT TTAGTGAGCT GTGATGCAGA TTGACAGTGT GAGATACAGG CAGGCTATGA
  ATAAAATCGC TGTACAGTTT ATCTCAAACT AATTTCCCCG ATTGCTTTAA TAGATGTTGT
  R
  TGTGATTGTG AAAAATTGAA AGTGTATTTT TGTTAGTGGT AAAGCTAACA AAGATAATAT
  TTCATAAAAT GGCTGACTGT TAATTTCGAT GAACATCAAA ATGGGATGTG GAATATTATT
  CAGTGTGAGA CCCCAGAGTC CTCAGAGCAA ATGGCAGATC AGGCCTTCCT TTGCTGATTC
  ACTTTAAAGG TAAATTATAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ
ss49565728	NES12906680	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ
rs29758252					SNP	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49565728	NES12906680	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16994113 () rs orientation: forward

Symbol	Name	Function Class
Gm66112	predicted gene, 66112	within coordinates
Rr573811	regulatory region 573811	1630 bp distal
Rr573812	regulatory region 573812	129 bp distal
Rr573813	regulatory region 573813	within coordinates
Rr573814	regulatory region 573814	757 bp proximal