rs29754743 SNP Detail

Summary

• ID
  rs29754743
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:14938800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGA TGATATCATG AAAAAGGTTC
  M
  CTGCCACAAT AAACGTCTTT TGGAG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49562676	NES12886361	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	C	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29754743					SNP	A	A	A	C	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49562676	NES12886361	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:14938800 () rs orientation: forward

Symbol	Name	Function Class
Car3	carbonic anhydrase 3	1359 bp downstream
Rr374551	regulatory region 374551	1944 bp upstream
Rr397608	regulatory region 397608	662 bp upstream
Rr573713	regulatory region 573713	1971 bp distal
Rr573714	regulatory region 573714	729 bp proximal
Rr573715	regulatory region 573715	825 bp proximal
Rr573716	regulatory region 573716	1368 bp proximal
Tssr28456	transcription start site region 28456	1968 bp downstream
Tssr28457	transcription start site region 28457	1906 bp downstream
Tssr28458	transcription start site region 28458	1709 bp downstream
Tssr28459	transcription start site region 28459	1672 bp downstream
Tssr28460	transcription start site region 28460	1586 bp downstream
Tssr28461	transcription start site region 28461	1530 bp downstream
Tssr28462	transcription start site region 28462	1493 bp downstream
Tssr28463	transcription start site region 28463	1442 bp downstream
Tssr28464	transcription start site region 28464	1401 bp downstream
Tssr28465	transcription start site region 28465	1262 bp downstream
Tssr32653	transcription start site region 32653	1936 bp upstream
Tssr32654	transcription start site region 32654	1203 bp upstream