rs29747265 SNP Detail

Summary

• ID
  rs29747265
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:109484074 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGCCTACC CCTCCTGCAG
  AAAAGCTCTG GCTTAAACGA CTTTTCAGGA GGAAGAACAT AAAACGGTTG GGAAGGGAAG
  TGGGACGCAG TGACAGATGC CTGAAACCTC AGTCCCTGGG GAGGCTGAGG CAAGAGGATC
  CCTTGCATGT ATGGAGCTGA GATCAGCTAC TGCAGCATAG TAAGGCCTTA GTTCAAAACC
  W
  CAACAAAAAT ATAGGCGCTA TAGTTTCCAG AATATATCCT TTGTGTGAAT CCAAACTTTC
  ACAACCCCAC CAAGTTAATA ACAATGGTAA CACTAAAGAA TCACTTAATG ATTCAAACAC
  TTAAGACAAA TGAACTCTCA ACCACCATCC TGGCGAAGTC ATGGCTGTTA TAATTTTCCC
  TGAAAGATGA GGAACCACAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46878945	NES10702717	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29747265					SNP	A	A	A	A	A	A	A	A	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46878945	NES10702717	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109484074 () rs orientation: forward

Symbol	Name	Function Class
Rr583434	regulatory region 583434	1444 bp proximal
Vav3	vav 3 oncogene	Intron