rs29736212 SNP Detail

Summary

• ID
  rs29736212
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:109373101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCCCTCCC TCCCTCCCTT
  CCTTCCTTCC TTCCTTCCTT CCTTCCTTCC TTCCTTCTGC CTTTATATTA TAGTAATTCT
  CAGAAAAATT CTGTCTATGG AATCATATAG AATCTATAGG CTTATAGTTG AGCTATAAAA
  TGCATTACTC ATTTAATTAA CTCATATCAT TTTTTTTCTT GTCCCTATTT TTGACACTGT
  R
  ACTAAGAGTG TTGCATAGGT GGAATGTGCT GTCATTATAA ACACAGGTAG AGATTATATG
  CTCAAATAGT TTAATTAAGA GAAATTTCTT TATTTCTTCC TTGACCAAGT TATCATTGAG
  TAGAGTGTTG TTCAGCTTCC ATGTGCATGT GGGCTTTCTA TTGTTTATGT TGTTATCAAA
  GACCAACCTT AGACTGTGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss46876632	NES10707304	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs29736212					SNP	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46876632	NES10707304	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109373101 () rs orientation: forward

Symbol	Name	Function Class
Rr583417	regulatory region 583417	1462 bp proximal
Rr583418	regulatory region 583418	1777 bp proximal
Vav3	vav 3 oncogene	Intron