rs29734170 SNP Detail

Summary

• ID
  rs29734170
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129024834 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGTCCACGG CGTACTGTCT TAGCAGTCTG CATAGATTAA
  GACACTAATG TGCTCATTGT TTGCCAAATA TAGGAAGTGA GGATGGCCCA TGTTCCCGTG
  W
  GCTTTCACTT TAGTGAGGGA GACTGGGATG ACCTTAACCC GTGGAATAAA CAGGTCCTGA
  GCGGAGACTA GAGCTCTCTG GCCCAGGATT CTTCCAGCT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45358584	mCV23185325	ABI	CRAMUS_MOUSE	f	SNP	A	T
ss147582203	ENSMUSSNP3527269	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs29734170					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129024834 () rs orientation: forward

Symbol	Name	Function Class
Gm14029	predicted gene 14029	within coordinates
Gm39932	predicted gene, 39932	within coordinates
Rr564860	regulatory region 564860	1189 bp distal
Rr564861	regulatory region 564861	931 bp distal
Rr564862	regulatory region 564862	within coordinates
Rr564863	regulatory region 564863	446 bp proximal
Rr564864	regulatory region 564864	889 bp proximal
Tssr26190	transcription start site region 26190	863 bp downstream