rs29732306 SNP Detail

Summary

• ID
  rs29732306
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:121069019 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCGGC CAGCGCTGTG CTGGCAGCAA
  W
  GATGAGGTAA GAGGAAGCCA GGTAG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J
ss46334497	mCV24890763	ABI	CRAMUS_MOUSE	f	SNP		A	T		T
ss61237526	NES16854898	PERLEGEN	MM_PANEL2	f	SNP	A			A		A		T	A	A
ss137064555	ENSMUSSNP86575	ENSEMBL	ENSEMBL_Sanger	f	SNP		A			T
ss323230732	CHEV_9_121149071	CHEVERUD	SCREENING_POP	f	SNP							A				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J
rs29732306					SNP	A	A	T	A	T	A	A	T	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61237526	NES16854898	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121069019 () rs orientation: forward

Symbol	Name	Function Class
Rr688903	regulatory region 688903	1499 bp distal
Rr688904	regulatory region 688904	391 bp proximal
Rr688905	regulatory region 688905	515 bp proximal
Rr688906	regulatory region 688906	1938 bp proximal
Ulk4	unc-51-like kinase 4	Intron