rs29715854 SNP Detail

Summary

• ID
  rs29715854
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:119071722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCGGA ACCAGGCTGT CAAGATGGCC
  S
  AGTGGCTGAA GGTGCTTGTC ACCAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45353904	mCV24414204	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	G	G
ss147326940	ENSMUSSNP1641933	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29715854					SNP	C	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119071722 () rs orientation: forward

Symbol	Name	Function Class
Rr563451	regulatory region 563451	605 bp distal
Rr563452	regulatory region 563452	1354 bp proximal
Spint1	serine protease inhibitor, Kunitz type 1	Intron
Tssr19620	transcription start site region 19620	594 bp downstream