rs29713345 SNP Detail

Summary

• ID
  rs29713345
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:15029551 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTGGAT TGACAGGTGT
  TAAGAGAAAA CCTGGGAGGC TAAGAATATT CACAAGTGAA GTAAAGTTGT GAGGTGACTG
  GAGTTCTCTG CGTATGAACC TGCCTCATGT CGTCCCAGTT AACATGGCCC AGGCAAAGTT
  AAGTAGAAGC ACTTATGTCT TTGCCAGTCC TCCTTGCCTT CTGGCCCTCT TGTTTTCATT
  R
  CTCTATATTA CAATGGATCG TATTTACCTC TGTCGATGTC TGTTTACATT GCTAGCGGAT
  ACCTGCTTTA AAATTCACTG TAGTGATGCT GGGAACAAAG ATTTGTCACT AACACACACC
  TGTGCTTAGC AGAGGATGAT ATGGTGAACA CTGTCAACTT GACAAGATCT AGAGTCACCT
  AGGAGACAAA GCTCTGGATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49562111	NES12903114	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29713345					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49562111	NES12903114	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:15029551 () rs orientation: forward

Symbol	Name	Function Class
Rr573739	regulatory region 573739	931 bp proximal