rs29710655 SNP Detail

Summary

• ID
  rs29710655
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:50580115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTGGGCT GGGCTTTTTT
  TTTTTTACTA TTATTATATT ATATTATTAT TATTAATTTT TTTGCTTTTT GAGCTTGTTT
  TGTTTGCAAG GGGTGTATGT ATTCTACAGG ACTGTAATGA CTGTAGCTAT TCTGAATTTG
  GGTGGAGAGA AGCATATTCA AATATGTGGT TCTCTCAGTA AACATTTTTA TAACCAAAAT
  W
  AAAAAACTAT GGACAAATTA CAGAAGCTGG ATAGAAACTC CTCTGACATG TAGAAATATG
  GATAAGAGGA GACACAGCAG GGGGCAGCAG GTGTGTGTGC TGAGTGCTTA CAGCAGTTGG
  CCTGCTCCTT TGCCACCCCC TACTCCTCCC GATTCCCCCA TCTGGCTTCA CCCCACCACC
  CACCCTGTGC TCCTGCTAAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47873680	NES11694467	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	A	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29710655					SNP	T	T	T	T	T	T	T	T	T	T	A	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47873680	NES11694467	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50580115 () rs orientation: forward

Symbol	Name	Function Class
Gm38807	predicted gene, 38807	within coordinates
Rr630049	regulatory region 630049	1162 bp distal
Rr630050	regulatory region 630050	1319 bp distal