rs29710320 SNP Detail

Summary

• ID
  rs29710320
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:9665860 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTTTAGCA CACACTTTCT
  GCGTGAGCCA ACACAATTTG CAAAGCATGC AGTTGCTAGA AAACGAGAAG GCAGTAAGGT
  GGGACACATG ATCCCTGCCA AAGGCCCTTT GCATCACCTG AAGGTCAAGA GATAAGCTGC
  AAGATGAGCT AACCACCCCT GGAGAGCTGG CGCACAGCCA CACACCACAG CCAGTCACAC
  Y
  ACGGCCACTG AGAACAGCAA TGCTGGTACA CATTACCTCA TTTGAAAGCG GGTCTCGCCC
  CAGTTATTCA ATACAGAAAG TCTTGGTGGA CTTGCAGCCA TCTTGTGTGT CCAGGCTCCT
  CTTGAATGTA TTAAATCAGT GGATTGTCAA TCTTTCTAGG TTGCTAGGTT CTGCTTGGTT
  AAACTTCTAC ACAGCATTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49557406	NES12905281	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29710320					SNP	C	C	C	C	C	C	C	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49557406	NES12905281	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9665860 () rs orientation: forward

Symbol	Name	Function Class
Rr374491	regulatory region 374491	within coordinates
Rr573455	regulatory region 573455	592 bp distal
Rr573456	regulatory region 573456	within coordinates
Zfp704	zinc finger protein 704	Intron