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rs29710210 SNP Detail
Summary
  • ID
    rs29710210
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr3:9615695 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                AACATTTGTG TTGTTTTCTT
    ATGTAGGTTA ATTACAAGCA ATAAGATTAA TATCGTTAAA TAGCTCAGGG CTTGGGAAGT
    AAAAAGACAA CAAACATTTG AACATCAAAT GTTTACCACT TCTGTTTTTA GGAAAATGCA
    CCCTTCCCTC TCCCAGGAAG ACTGGGTCTT CCGAGGCTAA GTAAAAGCAG ATGGGAGTTT
    Y
    AATAATGTGA AGAGAAAACC CCATGCCCAA CTACCAACAC AGGAGAAGGA AAGGACTCTG
    CCTGACGCTG ACTGGCCTGA TACAGAATAG GGCTGACAGG AACATCCTTC ACTGCAGATA
    CTGGGTCACT GTAGGTGTGG CATCTGTTGG ACACCGTGTA TACACAAAGC AATGGTTTCT
    CAGCTTTGCA CAGGTCCCCG                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss49557708 NES12889127 PERLEGEN MM_PANEL2 f SNP T T T T T T C T T T T T T T C
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs29710210 SNP T T T T T T C T T T T T T T C
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss49557708 NES12889127 PERLEGEN MM_PANEL f SNP C/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:9615695 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr573443 regulatory region 573443 351 bp proximal
Rr573444 regulatory region 573444 1720 bp proximal
Zfp704 zinc finger protein 704 Intron

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory