rs29709137 SNP Detail

Summary

• ID
  rs29709137
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:9617434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAT GCTCTTCCGC TTTGCAATGG
  Y
  GTCCCTCTGC AACTGCAAGT AGACG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45548269	mCV23339100	ABI	CRAMUS_MOUSE	f	SNP		C	T						T
ss49557695	NES12889058	PERLEGEN	MM_PANEL2	f	SNP	C		T	C	T	C	T	C	T	C	C		C	C	C	C		C
ss134576434	ENSMUSSNP202930	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T						T
ss320651455	CHEV_3_9552374	CHEVERUD	SCREENING_POP	f	SNP												C					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29709137					SNP	C	C	T	C	T	C	T	C	T	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49557695	NES12889058	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9617434 () rs orientation: forward

Symbol	Name	Function Class
Gm65791	predicted gene, 65791	1342 bp upstream
Rr573443	regulatory region 573443	1073 bp distal
Rr573444	regulatory region 573444	within coordinates
Zfp704	zinc finger protein 704	Intron