rs29708470 SNP Detail

Summary

• ID
  rs29708470
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:9618363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGCCATATG CACCTAGGCC
  TGTCCATCCT GATGGATGTG CGGAGCTGCC TAGCACTCTC AGCCTAGAGA GATTCTGAGG
  ATCATTATCA CCACTTGCCC TGTGAAACTA TACGCATGTA CAGGGAACGT GTGTGTGTGT
  GTGTGTGTGT GTGTGCGCGC GCGCGCGTGT GTGCGTGTGT GACATCTTGA CAGCCGTGGA
  S
  TTAATGTGCT TACCAACCAG GGCCAGAAAG AACAGGGTGC AATTACCAGG ATGTAGAATC
  CAGTCTGTGT TTTATCCAGC AACCTCAGAA GAACTCAGGT AAACATGACA GTACTCAGTA
  CCACTGAAGA TCCTGGTGCA GTATGCCCCA GATACAAGTT TCCAGAGGCA CCTGATGGAC
  TCTCACATTC CGCAGACAAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49557686	NES12888961	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29708470					SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49557686	NES12888961	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9618363 () rs orientation: forward

Symbol	Name	Function Class
Gm65791	predicted gene, 65791	413 bp upstream
Rr573444	regulatory region 573444	686 bp distal
Zfp704	zinc finger protein 704	Intron