rs29707094 SNP Detail

Summary

• ID
  rs29707094
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:50380267 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTGTAGTC ACGGGGATGC
  AGTCAGAGCC TCATTTCTGT AACAAGCCTT CTCTGAAGGG TCTCCTCCTG TGAGACACCA
  GGGAAAGGAA GTGTCTGGCT AGAAAAGTGT GCGAGAATAA ACTGCAATGT GTGACTGAAT
  TTGAAAAAAA AAAGTCAGAA TGGAAGGAGA TAGAATTTGA GAATTCTGGA TTGTGAAGCA
  R
  GTTCCTGTCT TTAGTCTGCA GACTAGTAGC ACCAAAGACG TGTGGGTCCA ATCCCTAGAC
  CCACAACCAT CCATCTTAAA TGGCAAAAGG GACCTGGCAA GCATGGTAAT GATAATCCCT
  GGACATGGGA AGACTGTTTC AGACTATCCA GGCGGGCCCT ACCTAAGCAA GAGGACCCTT
  TAATGGGAAA CAGGACGAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47871916	NES11689875	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29707094					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47871916	NES11689875	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50380267 () rs orientation: forward

Symbol	Name	Function Class
Osbpl3	oxysterol binding protein-like 3	Intron
Rr630005	regulatory region 630005	1306 bp proximal
Tssr60914	transcription start site region 60914	1620 bp downstream