rs29701765 SNP Detail

Summary

• ID
  rs29701765
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:9627302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCAACAGCAG TTTTTGATGA CAGCTATAAT TATATTTCTT
  TTTAGTAAGC AGAAAGAAAA ATCGTGTTCC TTCCTATCAC GCGATTGAAA GTTTCCTTAC
  R
  ACAGAATCTC AATCGACTTA GATAGTCAAA AGTTGGCATT TACTAAATAA CCTAACGACT
  GCAAACAGAA GAAAATGTTA GAAATTAGAT CATTCTGCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45548965	mCV23606331	ABI	CRAMUS_MOUSE	f	SNP		G					A		G
ss49557611	NES12888514	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	G	A	G		A	G	A	A		A	A	A	A		A
ss134576536	ENSMUSSNP4095701	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							G
ss320651486	CHEV_3_9562242	CHEVERUD	SCREENING_POP	f	SNP												A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29701765					SNP	A	G	A	G	A	G	A	A	G	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49557611	NES12888514	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9627302 () rs orientation: forward

Symbol	Name	Function Class
Rr573446	regulatory region 573446	730 bp proximal
Zfp704	zinc finger protein 704	Intron