rs29700475 SNP Detail

Summary

• ID
  rs29700475
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:28779266 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTAG GCTCCTGGTT GTCCTTTCTA
  K
  AGTGATCTGA AACCCTGGCG GGCAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45480216	mCV24742604	ABI	CRAMUS_MOUSE	f	SNP							G		T
ss46873173	NES10834318	PERLEGEN	MM_PANEL2	f	SNP	G	T	T	G	G	T		G		G		G	T	G	G		G
ss320690995	CHEV_3_28624039	CHEVERUD	SCREENING_POP	f	SNP											T					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29700475					SNP	G	T	T	G	G	T	G	G	T	G	T	G	T	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46873173	NES10834318	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:28779266 () rs orientation: forward

Symbol	Name	Function Class
1700112D23Rik	RIKEN cDNA 1700112D23 gene	within coordinates
Rr574625	regulatory region 574625	1364 bp distal
Rr574626	regulatory region 574626	within coordinates
Slc2a2	solute carrier family 2 (facilitated glucose transporter), member 2	Intron