rs29698232 SNP Detail

Summary

• ID
  rs29698232
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:50381996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCTGTAAC CAGTCAGCTG
  CCTTCCCTTC ACATTCAAAT TCCACACGTG ACCGAAGGAT GCTGCCGAAG CAATTCTAGG
  CTTCACGGTT CACAGGAGGA GAATGGACAA GCCGCTGCCC AAAATAGTTT AATAAGGCCA
  GCAATGACTC ACAGAGTGAC AACAGGCCGA GCCAACAGAT GCCTGCACAG GGCAGCCCAG
  S
  CGAGAGGGAG GCTCATGGCA TAAAGTTAAA ACGGAAATTC AAGGACAGGA AGGGACATCC
  AGTTATAGAC CATGAGGACC ACCAAAAAGA CAAGGTCAAA CAAACATTTC AGCTTCATAA
  TTCATTAACA CCATCTTGGT GACAAAAACA ACAGACCCTT GAGTGTCAAA AGCAACTACA
  TGCACCTACC TAAGAATGTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47871932	NES11689780	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	C	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29698232					SNP	G	G	G	G	G	G	G	G	G	C	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47871932	NES11689780	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50381996 () rs orientation: forward

Symbol	Name	Function Class
Osbpl3	oxysterol binding protein-like 3	Intron
Rr630005	regulatory region 630005	within coordinates
Tssr60914	transcription start site region 60914	96 bp upstream