rs29695345 SNP Detail

Summary

• ID
  rs29695345
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:108970209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTAAGACCA TGTGGGTATT
  CTCTGTATGA AAGACAGCCA AAGGAACCTA TACAAGTAAG GCTTATCACT TTCCACGTTG
  TGGAGATCCA CTGCTCACAG AGAAAAAACC TGGGGATTTT AGTCTTTCAG CCACTGTAGT
  TGGCTTGATG TTCCTAACTC TGGCTTTAAC TTGATCATTA ACTTGGAAAG ATGGCAGTAA
  R
  ACGAATAAAC TATCACATTT GTGAGAAAAC TGATCAATGC ATTTTCTTGG TTGGATCAAT
  TTTCATGATA TTACAACATA GAGAGAAAAT ATTAAAAAAT TAATAAAACA ATAATAAAAA
  TTACTTTAAA ATTTACGTTG GCAAATCGTG GGTGCATCTT AATCAGAACA GCTTTACATA
  CTTTCTATAG TTATAGCTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46871905	NES10697169	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29695345					SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46871905	NES10697169	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108970209 () rs orientation: forward

Symbol	Name	Function Class
Gm36778	predicted gene, 36778	within coordinates
Rr397947	regulatory region 397947	124 bp upstream
Rr583384	regulatory region 583384	172 bp proximal
Rr583385	regulatory region 583385	305 bp proximal