rs29694706 SNP Detail

Summary

• ID
  rs29694706
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:108969831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGAGTACA TTTCTGTTGT
  CTTAAATCAC CTGTTTCTGG TAATTTACTG TAGCAGCCTG AGAAAACTGC CTTAGCTCAA
  ACTTAAACAA CCCCCCACCC CCAAACCAAA CCAAAAAACC CCAAAAACCC AAACCCAAAC
  CAAAAAACCA AACAATAACA AAAAAACAAA ACAAAACAAA AAACCCCAAC TCTTTCTCTG
  R
  ATATCCATAA ACTCAGGGTC AACTGGGTAC ACCACAAATG ACCGCAGTAG ACACACTTCC
  CAAGTGACGG TGAACGAGAG CGGGGCTTGC ACAACAAGTT TAAACGACAG AAGGAAAGCT
  TCTTTTTTCT CCCTCAGTAC AATCGGTTAA CACACAGCAC TTTGCTACAG ATGAAACCTT
  AAGACCATGT GGGTATTCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46871896	NES10697165	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29694706					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46871896	NES10697165	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108969831 () rs orientation: forward

Symbol	Name	Function Class
Gm36778	predicted gene, 36778	within coordinates
Rr397947	regulatory region 397947	502 bp upstream
Rr583384	regulatory region 583384	550 bp proximal
Rr583385	regulatory region 583385	683 bp proximal