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rs29676176 SNP Detail
Summary
  • ID
    rs29676176
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr18:77592166 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          GTGACCAGCG GGTCCTTCAG CAGAGGGAGC ACCATTGGGG
    ACTACAATGC CACTATGAGA CATAATGTCC GTGACCTCCG GGATGCCTTC AAGCAGAGAG
    R
    GCGAGATTCT GAAGGGGCCT TTTACTGTGA ATGCACCATT TTCTAAATAG GGAGTCTCAG
    ACCTAGATAA AAAATAAGTG AATGTCAGGA AGCTACCCT                       
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
LG/J
SM/J
ss39602604 mCV23424469 ABI CRAMUS_MOUSE f SNP G G A
ss147551893 ENSMUSSNP7200518 ENSEMBL ENSEMBL_Sanger f SNP G G
ss325701895 CHEV_18_77743209 CHEVERUD SCREENING_POP f SNP G G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
LG/J
SM/J
rs29676176 SNP G G A G G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr18:77592166 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C Intron
Noncoding-Transcript-Variant
Cpgi10275 CpG island 10275 1924 bp distal
Rr541132 regulatory region 541132 1870 bp distal
Rr541133 regulatory region 541133 469 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory