rs29669619 SNP Detail

Summary

• ID
  rs29669619
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:128136451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGGTCCCTAA AGATTAAATT CCAGTGAAAA GCCCCCAAGG GCAAATGTGC CCTGACCTGC
  CGAGCTTGGC ATGGGAGGTT CCTGTCTTAG TTACTGTTAT CATGGCAAAG GCAACTTATA
  GAAGAAAGCT TTTAACTGGG GGCTTGCTTA CTGCTTCAGA GGACGAATTG CTTATCATTG
  TGGCAGGGAG CATGGCAGCA CACAGCAGAT GGGGTGCTGG AGAGGTAACT GGAAGCTACA
  TCCTGATCTG CAGTCTGCAG GCAGCAAGGA CGGGGACACA CACACACACA CACACACACA
  S
  AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAAGA GAGAGGCCCA
  TCCCCAGTGG CACACCAACT GGGTATCAAA GATTCAAATA TGTGAGCCCA CGGGGGGGGG
  GGGGCTTTCT CACTCAAACC ACCACAGCAA CAGAGTCTAG AACAGGGCTT TGGAGGCAGC
  CCTGACTCTC TCCCCTTTCT TTACACAGAG CACCTCATTA TTCTCAGACA GTGCCATTCT
  GAGAGCAGGC ACCAAACCGA CAGTGAGTTT TGGCCAAGAC TTCCCTTTTT GCATGGTTGT
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45350318	mCV22523395	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29669619					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:128136451 () rs orientation: forward

Symbol	Name	Function Class
Rr397297	regulatory region 397297	655 bp upstream
Rr564694	regulatory region 564694	1 bp proximal
Rr564695	regulatory region 564695	626 bp proximal
Rr564696	regulatory region 564696	1274 bp proximal
Tssr26154	transcription start site region 26154	468 bp downstream
Tssr26155	transcription start site region 26155	504 bp downstream