rs29665074 SNP Detail

Summary

• ID
  rs29665074
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:8927779 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAAATGGG ACGACTTTAA
  ACAGGAAGGG AACGAAGGTT CCTAAAGCAA CCAATCTCTC TGTCTGAGAT GATTTTACGT
  AGAAACCTTT CAGCACACAG AAACGTACGC GTTTACAGTC TGGGTGTTTA GTCTGGACAA
  CCAACACTGA TGCTCCTTGT ACAACCCTGA GTTATCAGCC AGCCAAGACA AATTAAAAAT
  R
  TGATGGCAAA ACTTTGACAT TTCAGATATT CACAAAACCA GCACATGGAT TTAAAAAATA
  ATATGTTTAT GATGATGCTT TATTTTTTAA AATCTGGAAT ATTTTGAATC ATTGTGAATT
  TTAACAATAA AGCAAAAATA CAGCTGCTTT TGTTTTTGAA AAAGCACAGA AGCTAAACAC
  TTACTGATTG AATCTTCTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss49554670	NES12910165	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs29665074					SNP	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49554670	NES12910165	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:8927779 () rs orientation: forward

Symbol	Name	Function Class
Mrps28	mitochondrial ribosomal protein S28	Intron
Rr573330	regulatory region 573330	222 bp proximal
Rr573331	regulatory region 573331	1609 bp proximal
Tssr32560	transcription start site region 32560	551 bp downstream