rs29655351 SNP Detail

Summary

• ID
  rs29655351
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:108664900 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAGTCTGCA CAGTGGTAGG
  CGAGGAAATG GAGAAGGGGA ATTAAAACCA TCTCAGTTTC TGGAGTTATA TGGTTTAGAA
  TTCTGCTTCT AGATGTATTT ATCCTTCTTT TTTCCCCAAG GAAGCTATTT CTTACCTCAC
  CAGTTACTGT ATAATAAACC CCAGACCATG GACTGTTCCA GAGAAGAACA TAAAATCCTC
  R
  TAAGTGGTGA ATCTGTCCAC ATCGGATGGG CCCTGGTAGA TTTCAACTGT AAAAGTCCCT
  GGTATCTGAC AACTCGGGAC ACGAGACTCC AGAGATGCTT AACGAGGAAG CTCAGTGCAT
  GGCTTCGTGG CTCAGTACAT TCACCTTTGC CACACGTTCA CACCCTGGCT TGTTATCACA
  GTCGATTGAA TGACTAATTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46868419	NES10714397	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29655351					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46868419	NES10714397	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108664900 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Aknad1	AKNA domain containing 1			Coding-Synonymous
				Intron
Rr583304	regulatory region 583304			1665 bp distal
Rr583305	regulatory region 583305			1968 bp proximal