rs29645715 SNP Detail

Summary

• ID
  rs29645715
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:29827538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTTGAAAT AGCCCTGTTA
  GTTTGAGATC TGAAGGTGTG AACTCTTTCA GAAACATAAT TGAAACCATT ACTCAGTTCT
  GTAATTTGGG ATCACTCAGC AACAAGCTAC GGAAGTGAGA GGTGCAACAG CACACAGCAG
  TGCCTGGTTC CTCTCTTAGC TTTGTACTAG AAAAGTCTTC TCTATCTAGT CTTTATCAAA
  K
  TCTTGTGTGC TTATTTAAAG TCTTTTCTCC TGAATGGGAA GAGTTTGAAC CAATTATAAG
  CAAATAACCC TTTTTGTGCC TTCCTTTATG TGTATTTCTG TTGCCATGTC AACAAAATAT
  AGCTAACATT GAGTAAACCA GTGGGTGCTT GTATGCTACC TCCCTAGGGG AAGGTAAGTG
  TGGAGAAGTA GAAGGGGCCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47864686	NES11677585	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29645715					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47864686	NES11677585	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:29827538 () rs orientation: forward

Symbol	Name	Function Class
Ahcyl2	S-adenosylhomocysteine hydrolase-like 2	Intron
Rr627648	regulatory region 627648	within coordinates
Rr627649	regulatory region 627649	1141 bp proximal