rs29644907 SNP Detail

Summary

• ID
  rs29644907
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:28302106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACTACAATA TAATCATTTC AGTGTTTTGG AAAAGAGTTC
  GCCTATGCCA GGTTAAAATC TGTGCACATG CCCACTGGCG AGACTTTGAT GAATCTTGAG
  R
  CTTTTGTCTT CTGTCCTCTT TAGCTAGTTG ATCCGCATAA TCCCTCTTTG TTCCCTAGCT
  TCTTTGGCTT AAAGTTACCA CTCTGCCAAA CTTCCTGGGC                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46866285	NES10824554	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs29644907					SNP	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46866285	NES10824554	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:28302106 () rs orientation: forward

Symbol	Name	Function Class
Rr574554	regulatory region 574554	650 bp proximal