rs29644031 SNP Detail

Summary

• ID
  rs29644031
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:28301658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTCTCATG TAGGTTACAG
  GCCTCAAACT TGCAATGTAG CTCAGAACGA AACTAAATTT GGGATCCTTC TTCCTCCCAA
  GTGCTGAGAT TAGAGGTGTG CCGCACTGTC TGGTTTATGT GGTACTTGAT GTGGAGCCCA
  GGCCTTGTGA GTACCGTAGG CAAATACTCT ATCCACAATT GAGCTCTATC TCCAGCCCAA
  Y
  CACTGATTTT GATTAGAATT TTTAGCATAA GTTTAGCCAG AGAACAACTG CTTTATTATT
  GGAACCAAGT AGTTGTACAA AGTTGCAACT TTAAGATGTC AGCCTTTAGA GAACTCAAGA
  CTTGTTCAAC ATTTACTGAC TTCAAAGTGA CTAGCTTGAC TTGCCTTTAC TGGCTTCCTC
  ACTAAACGTC ATAATTACTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46866279	NES10824549	PERLEGEN	MM_PANEL2	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs29644031					SNP	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46866279	NES10824549	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:28301658 () rs orientation: forward

Symbol	Name	Function Class
Gm37098	predicted gene, 37098	1743 bp downstream
Rr574554	regulatory region 574554	1098 bp proximal