rs29636695 SNP Detail

Summary

• ID
  rs29636695
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:134127695 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAAA GGGAGAGGGG CGGGAGGGGC
  S
  GGCAGAATAT TTGCTAAACA GGTCC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45846180	mCV23753689	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G	G
ss144500659	ENSMUSSNP3861845	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C		G
ss321694850	CHEV_5_134574726	CHEVERUD	SCREENING_POP	f	SNP						C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29636695					SNP	G	G	C	G	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:134127695 () rs orientation: forward

Symbol	Name	Function Class
Castor2	cytosolic arginine sensor for mTORC1 subunit 2	892 bp upstream
Cpgi16713	CpG island 16713	264 bp proximal
Gm15627	predicted gene 15627	within coordinates
Rr621932	regulatory region 621932	within coordinates
Rr621933	regulatory region 621933	331 bp proximal
Tssr49079	transcription start site region 49079	836 bp upstream
Tssr49080	transcription start site region 49080	848 bp upstream
Tssr49081	transcription start site region 49081	911 bp upstream