rs29621982 SNP Detail

Summary

• ID
  rs29621982
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129025293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAA AGCTGGTCTG GATGGAAGGC
  R
  CAGTCGTGGA AAGCCAGCCC TGGCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss45346715	mCV23185313	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss147582223	ENSMUSSNP3822851	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss320504363	CHEV_2_129009109	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs29621982					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129025293 () rs orientation: forward

Symbol	Name	Function Class
Gm14029	predicted gene 14029	within coordinates
Gm39932	predicted gene, 39932	within coordinates
Rr564860	regulatory region 564860	1648 bp distal
Rr564861	regulatory region 564861	1390 bp distal
Rr564862	regulatory region 564862	257 bp distal
Rr564863	regulatory region 564863	within coordinates
Rr564864	regulatory region 564864	430 bp proximal
Tssr26190	transcription start site region 26190	404 bp downstream