rs29620928 SNP Detail

Summary

• ID
  rs29620928
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:102389070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAAAGGAA TAGACCATTG
  AAGACTATCT TACCACTACA GAAGAAAGAG CAAAGGGGGC ATTTTAAAGT CCAAACAAGT
  ATAGGCTTCT TTATGTACTT TTTAATAAAA AGTACGGGCA GAATCTGATG TTGTTGCTAC
  TAGTACTTGC TAAGATGTTG GAAGATTGCT ACAGAAGATG ATGCATCCAT GGTCCTGTAA
  R
  AAAATCTGGC TAGCATTGAG CAGCATGCCA TTCAAGTTGC TTTAAGCAAT GTGACTGGCC
  TGGGATTGTT GGGCACTCTG GGGTGTGAAT CTGATTAATG AATACTCACA CTGATCTGAT
  AGTTCTGAGG ACTGAGAAGC CTTGTGACTT GCCTTCTCAA CTAGATGCAG CTCCTCTTTA
  GGAACAACAG GAAAAAATCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45346796	mCV23730725	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss147115663	ENSMUSSNP6466733	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320438854	CHEV_2_102398882	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs29620928					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102389070 () rs orientation: forward

Symbol	Name	Function Class
Pamr1	peptidase domain containing associated with muscle regeneration 1	Intron
Rr561705	regulatory region 561705	213 bp proximal