rs29595776 SNP Detail

Summary

• ID
  rs29595776
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:27776742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCATACAGG ATGGTGAGTT
  TCTCTCTCAT ATTTTCATAT ACCCATATCT TGTACTATGC TCATTTTCCT TACCCAGTCC
  TCAGAGGTAC ATCTCAATAT AAACCCCAGC AAATCTGAGA CCAAAGAAGA GATGATGCAC
  CAGTTCAAAT GTGAAGGCAG GAGAGCAGTA TTGTAGTGCA CTCCCTAGCC TTTTATACAG
  R
  CTGACTGCAG GGCAATCTGC TTTACCCCAG CTGGAGATTC AGATTCATCT CATCCAAAGA
  CACCGTCATG GACACTGGCA GAGTAATACT GGATCAGATA CCTCCACAAG CAGTGACCAC
  TTGTTGTTCT TCTGTGTGAA GACTGTAAAG GAAACAGGGA GAAATTCACT TCTTGCCACA
  GCTGTGCCAC TCCTGGTAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46861174	NES10863710	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29595776					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46861174	NES10863710	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27776742 () rs orientation: forward

Symbol	Name	Function Class
Rr574477	regulatory region 574477	1618 bp proximal