rs29577577 SNP Detail

Summary

• ID
  rs29577577
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153475206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGGCCAAGC ACTGATAACA GGGAAGGGCA TAAACCAGAC
  TATGGTGTCC CTCTGAGAGT CTACACCAGA GTGAAGAAGC AGATCTGAGA CTTGGACAGG
  Y
  ATTAGTGTCA TCTGGACAAT TTCATGAAAC CGCCAATGGC TGGGTCCCAC CCCCAATCTC
  TGAGTTCTGA GCAGAAAGGC TTGGGGAACA GCTGGATAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45340952	mCV23862342	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss147999514	ENSMUSSNP3698957	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29577577					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153475206 () rs orientation: forward

Symbol	Name	Function Class
Commd7	COMM domain containing 7	505 bp upstream
Rr567710	regulatory region 567710	15 bp distal
Tssr26915	transcription start site region 26915	529 bp upstream
Tssr26916	transcription start site region 26916	493 bp upstream