rs29572973 SNP Detail

Summary

• ID
  rs29572973
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:119073852 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATTT GAACTCAGAA CCTTCTGAGT
  Y
  CATGGCAGAC GCCTTACTAA CTAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45339532	mCV24414238	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss147327055	ENSMUSSNP5801509	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29572973					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119073852 () rs orientation: forward

Symbol	Name	Function Class
Rr563452	regulatory region 563452	455 bp distal
Rr563453	regulatory region 563453	1561 bp proximal
Spint1	serine protease inhibitor, Kunitz type 1	Intron