rs29571527 SNP Detail

Summary

• ID
  rs29571527
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr13:92266583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAAAACTT TCCTTCGATT
  CTAGACTGCA CAACTTGAAT TTTCTGTATT TCTAATACAT ATATCTGCCA GCTTGGAAAT
  TAGTTTTCCA AATGACTAAG AGCACCTTCA AAAGTCAAAG GGCATCTTTT AAATTTCAAA
  CTCCTAACCC TTCTGATGTG ATTAAGCACT TATCATTTAC CGAAGTTAAT GATTTACAGT
  R
  AAAATCAAAA GCAATCTTGT GCCTGGTGTG GTTTCAGTTC CTCTGAGTTC TAAGCTTTGT
  TTTAAGAGGC AGAAACATTA GGTGGCCATC CTAACCACCA TTGTGTGAGC AGCAGCCTCC
  GAGGTTTACA GTTCATGCAT TCTGGTCAGA TCTGCACGGA AAATTCAGCC TAGAAATATT
  TTTCTGGAAC AGCAAAGGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39093199	mCV24963576	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss144931581	ENSMUSSNP2998200	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss324479872	CHEV_13_92900030	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29571527					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:92266583 () rs orientation: forward

Symbol	Name	Function Class
Rasgrf2	RAS protein-specific guanine nucleotide-releasing factor 2	Intron
Rr483653	regulatory region 483653	1571 bp proximal
Tssr4138	transcription start site region 4138	1472 bp downstream
Tssr123423	transcription start site region 123423	1532 bp downstream
Tssr123424	transcription start site region 123424	1723 bp downstream
Tssr123425	transcription start site region 123425	1743 bp downstream
Tssr123426	transcription start site region 123426	1774 bp downstream
Tssr123427	transcription start site region 123427	1802 bp downstream